At a Glance
- Tasks: Support bioimaging data management and collaborate with a global scientific community.
- Company: Join EMBL-EBI, a leader in biological data storage and analysis.
- Benefits: Enjoy flexible working, generous leave, and comprehensive health coverage.
- Other info: Be part of an innovative culture on the beautiful Wellcome Genome Campus.
- Why this job: Make a real impact in science while developing your skills in a supportive environment.
- Qualifications: Degree in Biology, Bioinformatics, or Computer Science; MSc preferred.
The predicted salary is between 51750 - 63250 £ per year.
The revolution in imaging technologies has led to the need to share, integrate and reuse image data in a comprehensive way. EMBL-EBI's imaging databases, EMPIAR and the BioImage Archive provide the means to store and search life science datasets from all imaging technologies at all scales and across all modalities.
What you'll do
- You will be working to support our resources' operational and data management development activities.
- You'll support depositors to the BioImage Archive and EMPIAR, providing expertise, guidance and targeted curation.
- You'll work with data generators, data consumers and networking organisations on data and metadata standards, both working with schema and tools directly and relaying needs and priorities to the core software development team.
- Using AI approaches to improve our operational activities will be a key part of the role.
- As the BioImage Archive is a developing project, you will be able to shape its development, community and overall success.
Primary duties & responsibilities
- Support data deposition and import of data into the BioImage Archive and EMPIAR, providing expert advice to depositors, and developing data pipelines for complex submissions.
- Work with the bioimaging community on standards, processes and tools for managing biological images, including programmatic implementation of metadata in schema languages, and participation in community format development, e.g. OME-Zarr.
- Curate and standardise data and metadata across different scientific domains to address the needs of diverse bioimaging communities.
- Work with software developers within the BioImage Archive, EMPIAR and the wider EMBL-EBI teams to guide development priorities and test new features.
- Create documentation and training materials to support users of the BioImage Archive.
You will have
- A first degree in Biology, Bioinformatics, Computer Science or a related discipline, and a relevant higher degree such as a MSc. A PhD or equivalent work experience is preferred.
Skills and experience
- Good understanding of data collection, handling, visualisation, interpretation, archiving, dissemination etc. for at least one common imaging modality (e.g. light or electron microscopy).
- Experience developing scripts and tools for data transformation and processing (e.g. in Python, Julia or similar languages).
- Experience working with common data exchange formats, particularly JSON.
- Demonstrated knowledge of research imaging techniques broadly.
- Familiarity with data standards and ontologies, and experience with schema languages such as LinkML.
Personal attributes
- Curiosity about science and bioimaging.
- A strong desire to learn new skills and technologies.
- Excellent communication and interpersonal skills.
- Ability to work to tight deadlines.
- The ability to work both independently and as part of a team.
You may also have
- Post-doctoral experience in a life sciences research lab or bioimaging facility, either as a data producer or as a collaborator with data producers on microscopy data management and/or image processing.
- Specific experience working with cross-modality biological data with an imaging component, e.g. spatial transcriptomics or spatial proteomics.
- Specific experience working with emerging/next generation file formats, particularly OME-Zarr.
- Experience with the management of research data, including understanding of and adherence to appropriate metadata standards.
- Experience with bioimage analysis tools and techniques.
- Experience working with semantic technologies including ontologies, data curation and JSON schema-based data validation.
- Experience developing training materials and/or running training courses.
Contract length: Grant-funded, 18 month fixed-term Staff Member contract.
Salary: Grade 5 - Monthly salary starting at £3,452.05 per month after tax but excluding pension and insurance contributions. Plus, generous benefits.
Why join us
- Do something meaningful: At EMBL-EBI you can apply your talent and passion to accelerate science and tackle some of humankind's greatest challenges.
- Join a culture of innovation: We are located on the Wellcome Genome Campus, alongside other prominent research and biotech organisations, and surrounded by beautiful Cambridgeshire countryside.
- Enjoy lots of benefits: Financial incentives, flexible working arrangements, private medical insurance, generous time off, relocation package, campus life benefits, family benefits, and benefits for non-UK residents.
What else you need to know
- International applicants: We recruit internationally and successful candidates are offered visa exemptions.
- Diversity and inclusion: At EMBL, we believe that diverse teams drive innovation and scientific excellence. We encourage applications from candidates of all genders, identities, nationalities and/or any other diverse backgrounds.
BioImaging Bioinformatician in Cambridge employer: European Molecular Biology Laboratory
ELIXIR is an exceptional employer that champions collaboration and innovation in the life sciences sector. With a strong commitment to employee growth, it offers flexible working arrangements, comprehensive benefits, and a supportive work culture that values trust and partnership. Located at the heart of Europe's research landscape, ELIXIR provides unique opportunities to engage with leading organisations and make a significant impact on the future of bioinformatics.
Contact Details:
European Molecular Biology Laboratory Recruitment Team
StudySmarter Expert Advice🤫
We think this is how you could land BioImaging Bioinformatician in Cambridge
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We think you need these skills to ace BioImaging Bioinformatician in Cambridge
Some tips for your application 🫡
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How to prepare for a job interview at European Molecular Biology Laboratory
✨Brush Up on Your Biotech Basics
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