Ensembl Dataflow Coordinator

Ensembl Dataflow Coordinator

London Full-Time Home office (partial)
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At a Glance

  • Tasks: Lead the integration of eukaryotic genome data into Ensembl and enhance analysis pipelines.
  • Company: Join EMBL-EBI, a global leader in biological data analysis and dissemination.
  • Benefits: Enjoy flexible working, generous leave, private medical insurance, and a vibrant campus life.
  • Why this job: Make a real impact on healthcare and biodiversity while working in an innovative, inclusive culture.
  • Qualifications: Master’s or PhD in genetics, genomics, or bioinformatics with team management experience.
  • Other info: Remote interviews in June 2025; hybrid work model with at least 3 office days.

We are seeking a coordinator to oversee incorporation of the increasingly large volumes of eukaryotic genome data into Ensembl. You will provide leadership and vision for our eukaryotic genome analysis pipelines and have extensive knowledge of genome annotation, comparative genomics, and the Ensembl infrastructure. You will be expected to work closely with all Ensembl teams to ensure data is being processed and released through Ensembl in as efficient a manner as possible, identifying and removing barriers to scaling, and maximising user impact.

You will have significant prior experience working within international consortia, where you provide leadership in global consortia in key areas such as biodiversity and pangenomics, and use your network of collaborators to identify major drivers for the future growth of data in Ensembl.

You have:

  • A Master’s or PhD in genetics, genomics, or bioinformatics.
  • Experience managing medium-sized teams, cross-team coordination and working within large international consortia.
  • A deep understanding of genome annotation, comparative genomics, and the Ensembl infrastructure.
  • Experience managing large genomics projects and balancing service delivery with development capacity.
  • Advanced knowledge of Ensembl APIs, schemas, and release processes.
  • Strong technical skills in genomics, genome annotation, experimental data types (ONT, Iso-seq, Ribo-seq), and comparative genomics.
  • A strong network of global collaborators and experience engaging with key stakeholders.
  • Excellent communication and leadership skills, with the ability to work across multi-institute, remote teams.

You may also have:

  • Experience in grant writing, budgeting and reporting.
  • Knowledge of pangenomics and its relationship with genome annotation.
  • Experience with AI-ready data and assessing AI model outputs.
  • Experience with cloud, hybrid-cloud and containerisation.
  • Familiarity with event organisation and training delivery.

Contract length: 3 years (grant based contract)

Salary: Monthly salary starting at £4,716 after tax but excluding pension and insurance contributions. Plus generous benefits.

Other Helpful Information:

  • Interviews would likely take place early June 2025 remotely.
  • Our team works in a Hybrid pattern and this role would require at least 3 days spent working from the office.

Why join us:

At EMBL-EBI you can apply your talent and passion to accelerate science and tackle some of humankind's greatest challenges. EMBL-EBI, part of the European Molecular Biology Laboratory, is a worldwide leader in the storage, analysis and dissemination of large biological datasets. We provide the global research community with access to publicly available databases and tools which are crucial for the advancement of healthcare, food security, and biodiversity.

We are located on the Wellcome Genome Campus, alongside other prominent research and biotech organisations, and surrounded by beautiful Cambridgeshire countryside. This is a highly collaborative and inclusive community where our employees enjoy a relaxed atmosphere. We are committed to ensuring our employees feel valued, supported and empowered to reach their professional potential.

Enjoy Lots Of Benefits:

  • Financial incentives: Monthly family, child and non-resident allowances, annual salary review, pension scheme, death benefit, long-term care, accident-at-work and unemployment insurances.
  • Flexible working arrangements - including hybrid working patterns.
  • Private medical insurance for you and your immediate family (including all prescriptions and generous dental & optical cover).
  • Generous time off: 30 days annual leave per year, in addition public holidays.
  • Relocation package including installation grant (if required).
  • Campus life: Free shuttle bus to and from work, on-site library, subsidised on-site gym and cafeteria, casual dress code, extensive sports and social club activities (on campus and remotely).
  • Family benefits: On-site nursery, 10 days of child sick leave, generous parental leave, holiday clubs on campus and monthly family and child allowances.
  • Benefits for non-UK residents: Visa exemption, education grant for private schooling, financial support to travel back to your home country every second year and a monthly non-resident allowance.

For detailed information please visit our employee benefits page.

What else you need to know:

  • International applicants: We recruit internationally and successful candidates are offered visa exemptions.
  • Diversity and inclusion: At EMBL, we strongly believe that inclusive and diverse teams benefit from higher levels of innovation and creative thought. We encourage applications from women, LGBTQ+ & individuals from all nationalities.

How to apply: To apply please submit a cover letter and a CV through our online system. Applications will close at 23:59 CET on the date shown below. We aim to provide a response within two weeks after the closing date.

Closing Date: 06/07/2025

Ensembl Dataflow Coordinator employer: European Bioinformatics Institute | EMBL-EBI

At EMBL-EBI, we offer a unique opportunity to contribute to groundbreaking research in genomics while enjoying a supportive and inclusive work culture. Located on the picturesque Wellcome Genome Campus in Cambridge, our employees benefit from flexible working arrangements, generous leave policies, and a wealth of professional development opportunities, all within a collaborative environment that values innovation and diversity.
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Contact Detail:

European Bioinformatics Institute | EMBL-EBI Recruiting Team

StudySmarter Expert Advice 🤫

We think this is how you could land Ensembl Dataflow Coordinator

✨Tip Number 1

Network with professionals in the field of genomics and bioinformatics. Attend relevant conferences or webinars where you can meet potential colleagues from EMBL-EBI and discuss your shared interests in genome data and analysis.

✨Tip Number 2

Familiarise yourself with the Ensembl infrastructure and its APIs. Understanding how these systems work will not only help you in interviews but also demonstrate your commitment to the role and your proactive approach to learning.

✨Tip Number 3

Showcase your leadership experience by preparing examples of how you've successfully managed teams or projects in the past. Be ready to discuss specific challenges you faced and how you overcame them, especially in an international context.

✨Tip Number 4

Engage with current trends in pangenomics and AI applications in genomics. Being knowledgeable about these topics will set you apart and show that you're forward-thinking, which is crucial for a role focused on future growth in data.

We think you need these skills to ace Ensembl Dataflow Coordinator

Leadership Skills
Genome Annotation Expertise
Comparative Genomics Knowledge
Ensembl Infrastructure Familiarity
Project Management
Cross-Team Coordination
Experience with International Consortia
Technical Skills in Genomics
Advanced Knowledge of Ensembl APIs
Data Processing Efficiency
Stakeholder Engagement
Communication Skills
Problem-Solving Skills
Networking Abilities
Experience with AI-Ready Data

Some tips for your application 🫡

Tailor Your Cover Letter: Make sure to customise your cover letter for the Ensembl Dataflow Coordinator role. Highlight your experience in managing genome data, your leadership skills, and your familiarity with international consortia. Use specific examples that demonstrate your understanding of genome annotation and comparative genomics.

Showcase Relevant Experience: In your CV, emphasise your previous roles that involved cross-team coordination and managing medium-sized teams. Detail any large genomics projects you've worked on, particularly those that required balancing service delivery with development capacity.

Highlight Technical Skills: Clearly outline your technical skills related to genomics, including your knowledge of Ensembl APIs, schemas, and release processes. Mention any experience you have with experimental data types like ONT, Iso-seq, and Ribo-seq, as these are crucial for the role.

Demonstrate Communication Skills: Since excellent communication is key for this position, provide examples in your application that showcase your ability to work across multi-institute, remote teams. This could include instances where you successfully engaged with stakeholders or led collaborative projects.

How to prepare for a job interview at European Bioinformatics Institute | EMBL-EBI

✨Showcase Your Leadership Experience

As a Dataflow Coordinator, you'll need to demonstrate your leadership skills. Prepare examples of how you've successfully managed teams and coordinated projects in international consortia. Highlight specific challenges you faced and how you overcame them.

✨Demonstrate Technical Knowledge

Make sure you're well-versed in genome annotation, comparative genomics, and the Ensembl infrastructure. Be ready to discuss your experience with Ensembl APIs and schemas, as well as any relevant experimental data types. This will show that you have the technical expertise required for the role.

✨Prepare for Collaborative Scenarios

Since this role involves working closely with various teams, think of examples where you've successfully collaborated across different departments or organisations. Be prepared to discuss how you handle conflicts and ensure smooth communication among diverse groups.

✨Engage with Future Trends

Stay informed about the latest trends in genomics and bioinformatics, especially regarding pangenomics and AI-ready data. Be ready to share your thoughts on how these trends could impact the future of Ensembl and how you can contribute to its growth.

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