Research Software Engineer - BioImaging Data Resources

Research Software Engineer - BioImaging Data Resources

Full-Time 39636 - 39636 £ / year (est.) No working from home possible
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At a Glance

  • Tasks: Design and implement systems for biological image data automation and exploration.
  • Company: Join EMBL, a leader in bioimaging and scientific innovation.
  • Benefits: Enjoy flexible working, generous leave, and private medical insurance.
  • Other info: Diverse and inclusive workplace with excellent career growth opportunities.
  • Why this job: Make a real impact in bioimaging while working with cutting-edge technology.
  • Qualifications: Degree in computer science or life sciences; full stack development experience required.

The predicted salary is between 39636 - 39636 £ per year.

Role Overview

The role will work across the technical stack to support scaling and automation of deposition and presentation systems for high volumes of biological image data. You will extend and build on the EMBL-EBI’s imaging resources to enable better automation, integrate with high performance computing and storage resources and develop/implement new functionality.

Responsibilities

  • Design and implement systems to support rapid deposition, curation and archival of biological image data, including back-end, front-end and supporting infrastructure.
  • Develop systems for interactive online exploration of biological image data, working with existing tools, extending these, and developing new solutions as appropriate.
  • Act as liaison between the BioImage Archive/EMPIAR and EMBL-EBI's compute/storage infrastructure teams to deploy and manage these systems.
  • Coordinate with other service teams on shared development and process implementation.
  • Contribute to the broader team activities, including helpdesk support, planning, design review and improvement of the team's software development processes.

Qualifications

You should have a university degree in computer science, life sciences or a related discipline and have several years' experience in a software development capacity.

  • Substantial experience developing full stack applications.
  • Extensive hands‑on experience with Javascript and Python.
  • Working with relational databases such as PostGres or MySQL.
  • Software development lifecycle, including design, implementation, testing, continuous integration, deployment and version control.
  • Working with Linux systems.

Preferred Additional Experience

  • Experience designing data systems that operate at scale.
  • Experience working with BioImaging data from one or more modalities.
  • Experience with NoSQL databases, such as MongoDB.
  • Experience with batch scheduling systems such as SLURM.
  • Experience with containerisation (e.g. Docker) and container orchestration (e.g. Kubernetes).
  • Infrastructure‑as‑code deployment tools such as Ansible or Terraform.

Contract and Salary

Contract Length: 13-month, project-based, fixed-term contract.

Salary: Grade 5.0 – Monthly salary starting at £3,303 per month after tax but excluding pension and insurance contributions. Plus, generous benefits.

Benefits

  • Financial incentives: Monthly family, child and non-resident allowances, annual salary review, pension scheme, death benefit, long-term care, accident-at-work and unemployment insurances.
  • Flexible working arrangements – including hybrid working patterns.
  • Private medical insurance for you and your immediate family (including all prescriptions and generous dental & optical cover).
  • Generous time off: 30 days annual leave per year, in addition public holidays.
  • Relocation package including installation grant (if required).
  • Campus life: Free shuttle bus to and from work, on‑site library, subsidised on‑site gym and cafeteria, casual dress code, extensive sports and social club activities (on campus and remotely).
  • Family benefits: On‑site nursery, 10 days of child sick leave, generous parental leave, holiday clubs on campus and monthly family and child allowances.
  • Benefits for non‑UK residents: Visa exemption, education grant for private schooling, financial support to travel back to your home country every second year and a monthly non-resident allowance.

Diversity & Inclusion

At EMBL, we believe that diverse teams drive innovation and scientific excellence. We encourage applications from candidates of all genders, identities, nationalities and any other diverse backgrounds. All qualified applicants will receive equal consideration regardless of gender, sex, sexual orientation, race, colour, disability, marital status, age or religion.

Research Software Engineer - BioImaging Data Resources employer: 1000 European Molecular Biology Laboratory

At EMBL, we pride ourselves on being an exceptional employer, offering a dynamic work environment that fosters innovation and collaboration in the field of bioimaging. Our generous benefits package, including flexible working arrangements, extensive family support, and a vibrant campus life, ensures that our employees thrive both personally and professionally. With a strong commitment to diversity and inclusion, we provide ample opportunities for growth and development, making EMBL an ideal place for those seeking meaningful and rewarding careers in scientific research.

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Contact Details:

1000 European Molecular Biology Laboratory Recruitment Team

StudySmarter Expert Advice🤫

We think this is how you could land Research Software Engineer - BioImaging Data Resources

Tip Number 1

Network like a pro! Reach out to folks in the industry, attend meetups or webinars, and connect with people on LinkedIn. You never know who might have the inside scoop on job openings or can put in a good word for you.

Tip Number 2

Show off your skills! Create a portfolio showcasing your projects, especially those related to biological image data or full-stack applications. This will give potential employers a taste of what you can do and set you apart from the crowd.

Tip Number 3

Prepare for interviews by brushing up on relevant technologies like Javascript, Python, and database management. Practice common interview questions and be ready to discuss your past experiences and how they relate to the role.

Tip Number 4

Don't forget to apply through our website! It’s the best way to ensure your application gets seen. Plus, we love seeing candidates who are proactive about their job search!

We think you need these skills to ace Research Software Engineer - BioImaging Data Resources

Full Stack Development
JavaScript
Python
Relational Databases (PostGres, MySQL)
Software Development Lifecycle
Linux Systems
Data System Design at Scale

Some tips for your application 🫡

Tailor Your CV:Make sure your CV is tailored to the Research Software Engineer role. Highlight your experience with full stack applications, especially in Javascript and Python, and any relevant projects you've worked on that relate to BioImaging data.

Craft a Compelling Cover Letter:Your cover letter is your chance to shine! Use it to explain why you're passionate about this role and how your skills align with the responsibilities outlined in the job description. Don’t forget to mention your experience with relational databases and Linux systems!

Showcase Your Projects:If you have any personal or professional projects that demonstrate your ability to design and implement systems for biological image data, make sure to include them. This will give us a better idea of your hands-on experience and problem-solving skills.

Apply Through Our Website:We encourage you to apply through our website for a smoother application process. It’s the best way for us to receive your application and ensure it gets the attention it deserves!

How to prepare for a job interview at 1000 European Molecular Biology Laboratory

Know Your Tech Stack

Make sure you’re well-versed in the technologies mentioned in the job description, especially Javascript and Python. Brush up on your full stack development skills and be ready to discuss how you've used these languages in past projects.

Showcase Your Problem-Solving Skills

Prepare examples of how you've tackled challenges in software development, particularly in relation to biological image data or similar fields. Be ready to explain your thought process and the impact of your solutions.

Understand the Bigger Picture

Familiarise yourself with the EMBL-EBI’s imaging resources and how they integrate with high-performance computing. This will help you articulate how your role as a Research Software Engineer fits into their mission and goals.

Ask Insightful Questions

Prepare thoughtful questions about the team dynamics, ongoing projects, and future developments in bioimaging data resources. This shows your genuine interest in the role and helps you assess if it’s the right fit for you.